Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.13■□□□□ 0.17
Crnkl1P63154 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.13■□□□□ 0.17
Crnkl1P63154 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Crnkl1P63154 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.13■□□□□ 0.17
Crnkl1P63154 Gm10138-203ENSMUST00000206952 366 ntBASIC16.13■□□□□ 0.17
Crnkl1P63154 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Crnkl1P63154 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.13■□□□□ 0.17
Crnkl1P63154 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crnkl1P63154 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Crnkl1P63154 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crnkl1P63154 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Crnkl1P63154 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.11■□□□□ 0.17
Crnkl1P63154 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.11■□□□□ 0.17
Crnkl1P63154 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Crnkl1P63154 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Gm15378-201ENSMUST00000121894 207 ntBASIC16.11■□□□□ 0.17
Crnkl1P63154 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.11■□□□□ 0.17
Crnkl1P63154 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crnkl1P63154 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.1■□□□□ 0.17
Crnkl1P63154 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Crnkl1P63154 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.1■□□□□ 0.17
Crnkl1P63154 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Crnkl1P63154 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.1■□□□□ 0.17
Crnkl1P63154 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.1■□□□□ 0.17
Crnkl1P63154 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.1■□□□□ 0.17
Crnkl1P63154 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crnkl1P63154 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms