Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.45■□□□□ 0.22
ThraP63058 Gm28033-201ENSMUST00000184224 96 ntBASIC16.45■□□□□ 0.22
ThraP63058 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ThraP63058 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ThraP63058 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.44■□□□□ 0.22
ThraP63058 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
ThraP63058 Gm37722-201ENSMUST00000193757 208 ntBASIC16.44■□□□□ 0.22
ThraP63058 Gm18669-201ENSMUST00000216049 778 ntBASIC16.44■□□□□ 0.22
ThraP63058 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ThraP63058 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ThraP63058 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.44■□□□□ 0.22
ThraP63058 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ThraP63058 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ThraP63058 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ThraP63058 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
ThraP63058 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ThraP63058 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ThraP63058 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.43■□□□□ 0.22
ThraP63058 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ThraP63058 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ThraP63058 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ThraP63058 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.42■□□□□ 0.22
ThraP63058 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Gm6623-201ENSMUST00000173570 544 ntBASIC16.42■□□□□ 0.22
ThraP63058 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ThraP63058 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ThraP63058 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
ThraP63058 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ThraP63058 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms