Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.53□□□□□ -0.4
Vamp3P63024 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Vamp3P63024 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vamp3P63024 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Vamp3P63024 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Vamp3P63024 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vamp3P63024 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Vamp3P63024 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.52□□□□□ -0.41
Vamp3P63024 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Vamp3P63024 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.52□□□□□ -0.41
Vamp3P63024 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.52□□□□□ -0.41
Vamp3P63024 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.52□□□□□ -0.41
Vamp3P63024 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.52□□□□□ -0.41
Vamp3P63024 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vamp3P63024 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vamp3P63024 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Vamp3P63024 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Vamp3P63024 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
Vamp3P63024 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Gm45444-201ENSMUST00000211394 898 ntBASIC12.51□□□□□ -0.41
Vamp3P63024 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Vamp3P63024 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.51□□□□□ -0.41
Vamp3P63024 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vamp3P63024 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vamp3P63024 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vamp3P63024 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vamp3P63024 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vamp3P63024 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms