Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfn1P62962 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pfn1P62962 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfn1P62962 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pfn1P62962 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.65□□□□□ -0.38
Pfn1P62962 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Gm42569-201ENSMUST00000200539 472 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Mtag2-201ENSMUST00000058665 714 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pfn1P62962 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pfn1P62962 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.65□□□□□ -0.38
Pfn1P62962 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfn1P62962 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pfn1P62962 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Gm6576-201ENSMUST00000169678 883 ntBASIC12.64□□□□□ -0.39
Pfn1P62962 Mir5133-201ENSMUST00000174955 77 ntBASIC12.64□□□□□ -0.39
Pfn1P62962 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfn1P62962 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pfn1P62962 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pfn1P62962 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfn1P62962 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfn1P62962 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfn1P62962 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.63□□□□□ -0.39
Pfn1P62962 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfn1P62962 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.63□□□□□ -0.39
Pfn1P62962 Gm13148-201ENSMUST00000118892 745 ntBASIC12.63□□□□□ -0.39
Pfn1P62962 Gm15375-201ENSMUST00000119510 849 ntBASIC12.63□□□□□ -0.39
Pfn1P62962 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfn1P62962 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms