Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b6P59708 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sf3b6P59708 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b6P59708 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b6P59708 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sf3b6P59708 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sf3b6P59708 Actl10-202ENSMUST00000226583 1501 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Gm7638-201ENSMUST00000121348 967 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.42□□□□□ -0.1
Sf3b6P59708 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b6P59708 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b6P59708 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b6P59708 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b6P59708 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b6P59708 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.41□□□□□ -0.1
Sf3b6P59708 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b6P59708 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.41□□□□□ -0.1
Sf3b6P59708 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.41□□□□□ -0.1
Sf3b6P59708 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3b6P59708 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b6P59708 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sf3b6P59708 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms