Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tpm1P58771 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tpm1P58771 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.17■□□□□ 0.5
Tpm1P58771 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tpm1P58771 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Gm18958-201ENSMUST00000174258 762 ntBASIC18.17■□□□□ 0.5
Tpm1P58771 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm1P58771 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.17■□□□□ 0.5
Tpm1P58771 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.16■□□□□ 0.5
Tpm1P58771 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.16■□□□□ 0.5
Tpm1P58771 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.16■□□□□ 0.5
Tpm1P58771 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.16■□□□□ 0.5
Tpm1P58771 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tpm1P58771 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tpm1P58771 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm1P58771 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Tpm1P58771 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.15■□□□□ 0.5
Tpm1P58771 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpm1P58771 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm1P58771 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm1P58771 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm1P58771 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm1P58771 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm1P58771 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Tpm1P58771 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.14■□□□□ 0.49
Tpm1P58771 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tpm1P58771 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tpm1P58771 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.14■□□□□ 0.49
Tpm1P58771 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm1P58771 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms