Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NcanP55066 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NcanP55066 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NcanP55066 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NcanP55066 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.08■□□□□ 0.33
NcanP55066 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NcanP55066 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.08■□□□□ 0.32
NcanP55066 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.08■□□□□ 0.32
NcanP55066 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NcanP55066 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.08■□□□□ 0.32
NcanP55066 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NcanP55066 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Mir6404-201ENSMUST00000183699 94 ntBASIC17.08■□□□□ 0.32
NcanP55066 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.08■□□□□ 0.32
NcanP55066 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.08■□□□□ 0.32
NcanP55066 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.08■□□□□ 0.32
NcanP55066 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NcanP55066 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.07■□□□□ 0.32
NcanP55066 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NcanP55066 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.07■□□□□ 0.32
NcanP55066 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.07■□□□□ 0.32
NcanP55066 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NcanP55066 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Mir6990-201ENSMUST00000183724 91 ntBASIC17.07■□□□□ 0.32
NcanP55066 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.07■□□□□ 0.32
NcanP55066 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NcanP55066 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.07■□□□□ 0.32
NcanP55066 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NcanP55066 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NcanP55066 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.06■□□□□ 0.32
NcanP55066 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NcanP55066 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.06■□□□□ 0.32
NcanP55066 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.06■□□□□ 0.32
NcanP55066 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NcanP55066 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Gm5177-201ENSMUST00000183092 997 ntBASIC17.06■□□□□ 0.32
NcanP55066 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.06■□□□□ 0.32
NcanP55066 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NcanP55066 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.05■□□□□ 0.32
NcanP55066 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Gm22175-201ENSMUST00000175007 78 ntBASIC17.05■□□□□ 0.32
NcanP55066 Gm20553-201ENSMUST00000204205 844 ntBASIC17.05■□□□□ 0.32
NcanP55066 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.05■□□□□ 0.32
NcanP55066 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.05■□□□□ 0.32
NcanP55066 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NcanP55066 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.05■□□□□ 0.32
NcanP55066 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NcanP55066 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NcanP55066 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NcanP55066 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.04■□□□□ 0.32
NcanP55066 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms