Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.27■□□□□ 0.36
NrlP54846 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.27■□□□□ 0.35
NrlP54846 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NrlP54846 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NrlP54846 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
NrlP54846 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.26■□□□□ 0.35
NrlP54846 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NrlP54846 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
NrlP54846 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Gm25745-201ENSMUST00000174945 133 ntBASIC17.26■□□□□ 0.35
NrlP54846 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.26■□□□□ 0.35
NrlP54846 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.26■□□□□ 0.35
NrlP54846 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.26■□□□□ 0.35
NrlP54846 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.26■□□□□ 0.35
NrlP54846 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.26■□□□□ 0.35
NrlP54846 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NrlP54846 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NrlP54846 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NrlP54846 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
NrlP54846 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NrlP54846 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.25■□□□□ 0.35
NrlP54846 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.25■□□□□ 0.35
NrlP54846 Gm8000-201ENSMUST00000188378 592 ntBASIC17.25■□□□□ 0.35
NrlP54846 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
NrlP54846 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NrlP54846 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.25■□□□□ 0.35
NrlP54846 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NrlP54846 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NrlP54846 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NrlP54846 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
NrlP54846 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NrlP54846 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.24■□□□□ 0.35
NrlP54846 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NrlP54846 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NrlP54846 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NrlP54846 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
NrlP54846 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NrlP54846 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NrlP54846 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NrlP54846 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NrlP54846 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NrlP54846 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NrlP54846 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms