Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Gm15920-201ENSMUST00000118998 402 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.1■□□□□ 0.17
Atxn1P54254 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.1■□□□□ 0.17
Atxn1P54254 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Mir8112-201ENSMUST00000184382 131 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.1■□□□□ 0.17
Atxn1P54254 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.1■□□□□ 0.17
Atxn1P54254 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.1■□□□□ 0.17
Atxn1P54254 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.1■□□□□ 0.17
Atxn1P54254 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Gm13186-201ENSMUST00000118031 316 ntBASIC16.09■□□□□ 0.17
Atxn1P54254 Gm14140-201ENSMUST00000119999 995 ntBASIC16.09■□□□□ 0.17
Atxn1P54254 Gm15173-201ENSMUST00000122049 433 ntBASIC16.09■□□□□ 0.17
Atxn1P54254 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.09■□□□□ 0.17
Atxn1P54254 Gm9727-201ENSMUST00000161387 555 ntBASIC16.09■□□□□ 0.17
Atxn1P54254 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Atxn1P54254 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Atxn1P54254 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Atxn1P54254 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atxn1P54254 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Atxn1P54254 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.08■□□□□ 0.17
Atxn1P54254 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.08■□□□□ 0.17
Atxn1P54254 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Phf7-203ENSMUST00000226565 1971 ntBASIC16.08■□□□□ 0.16
Atxn1P54254 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Atxn1P54254 Gm7230-201ENSMUST00000173026 815 ntBASIC16.08■□□□□ 0.16
Atxn1P54254 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.08■□□□□ 0.16
Atxn1P54254 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Atxn1P54254 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.08■□□□□ 0.16
Atxn1P54254 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Atxn1P54254 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atxn1P54254 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.07■□□□□ 0.16
Atxn1P54254 Gm6089-201ENSMUST00000197666 938 ntBASIC16.07■□□□□ 0.16
Atxn1P54254 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.07■□□□□ 0.16
Atxn1P54254 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atxn1P54254 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atxn1P54254 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms