Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox1P53783 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox1P53783 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.56■□□□□ 0.24
Sox1P53783 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Sox1P53783 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.55■□□□□ 0.24
Sox1P53783 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.55■□□□□ 0.24
Sox1P53783 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.55■□□□□ 0.24
Sox1P53783 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Gm45747-201ENSMUST00000212203 999 ntBASIC16.55■□□□□ 0.24
Sox1P53783 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.55■□□□□ 0.24
Sox1P53783 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.55■□□□□ 0.24
Sox1P53783 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sox1P53783 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox1P53783 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox1P53783 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox1P53783 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Gm15427-201ENSMUST00000117288 531 ntBASIC16.54■□□□□ 0.24
Sox1P53783 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.54■□□□□ 0.24
Sox1P53783 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.54■□□□□ 0.24
Sox1P53783 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.54■□□□□ 0.24
Sox1P53783 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.54■□□□□ 0.24
Sox1P53783 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Sox1P53783 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.54■□□□□ 0.24
Sox1P53783 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox1P53783 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Sox1P53783 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.53■□□□□ 0.24
Sox1P53783 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.53■□□□□ 0.24
Sox1P53783 Gm43125-201ENSMUST00000201724 730 ntBASIC16.53■□□□□ 0.24
Sox1P53783 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sox1P53783 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sox1P53783 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox1P53783 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sox1P53783 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sox1P53783 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.52■□□□□ 0.24
Sox1P53783 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox1P53783 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms