Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-1P50220 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-1P50220 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nkx2-1P50220 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.52□□□□□ -0.25
Nkx2-1P50220 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.52□□□□□ -0.25
Nkx2-1P50220 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-1P50220 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.52□□□□□ -0.25
Nkx2-1P50220 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-1P50220 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.51□□□□□ -0.25
Nkx2-1P50220 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Gm18666-201ENSMUST00000190039 958 ntBASIC13.51□□□□□ -0.25
Nkx2-1P50220 Gm37025-201ENSMUST00000195159 829 ntBASIC13.51□□□□□ -0.25
Nkx2-1P50220 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-1P50220 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-1P50220 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Gm10517-202ENSMUST00000192970 758 ntBASIC13.49□□□□□ -0.25
Nkx2-1P50220 Gm18025-201ENSMUST00000221733 862 ntBASIC13.49□□□□□ -0.25
Nkx2-1P50220 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms