Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps4bP46467 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.5■□□□□ 0.23
Vps4bP46467 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps4bP46467 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps4bP46467 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps4bP46467 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps4bP46467 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps4bP46467 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Dancr-204ENSMUST00000132389 2347 ntBASIC16.49■□□□□ 0.23
Vps4bP46467 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
Vps4bP46467 Gm18421-201ENSMUST00000204122 625 ntBASIC16.49■□□□□ 0.23
Vps4bP46467 Gm7213-201ENSMUST00000215977 950 ntBASIC16.49■□□□□ 0.23
Vps4bP46467 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps4bP46467 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps4bP46467 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps4bP46467 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps4bP46467 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Vps4bP46467 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps4bP46467 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.48■□□□□ 0.23
Vps4bP46467 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.48■□□□□ 0.23
Vps4bP46467 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Gm10819-201ENSMUST00000099988 561 ntBASIC16.48■□□□□ 0.23
Vps4bP46467 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps4bP46467 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vps4bP46467 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vps4bP46467 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps4bP46467 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Gm11336-201ENSMUST00000118168 334 ntBASIC16.47■□□□□ 0.23
Vps4bP46467 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps4bP46467 Gm29707-201ENSMUST00000196325 491 ntBASIC16.47■□□□□ 0.23
Vps4bP46467 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps4bP46467 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.47■□□□□ 0.23
Vps4bP46467 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vps4bP46467 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vps4bP46467 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms