Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Gm27867-201ENSMUST00000184778 125 ntBASIC15.33■□□□□ 0.04
Nkx2-6P43688 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Gm6376-201ENSMUST00000209407 580 ntBASIC15.33■□□□□ 0.04
Nkx2-6P43688 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.33■□□□□ 0.04
Nkx2-6P43688 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-6P43688 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-6P43688 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Gm2651-201ENSMUST00000203560 838 ntBASIC15.31■□□□□ 0.04
Nkx2-6P43688 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.31■□□□□ 0.04
Nkx2-6P43688 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.31■□□□□ 0.04
Nkx2-6P43688 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-6P43688 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44357-201ENSMUST00000195897 142 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm19658-201ENSMUST00000196231 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44367-201ENSMUST00000196836 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44350-201ENSMUST00000197197 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44390-201ENSMUST00000197533 144 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44313-201ENSMUST00000198018 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44486-201ENSMUST00000198508 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44314-201ENSMUST00000199263 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44394-201ENSMUST00000199558 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44484-201ENSMUST00000199873 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44466-201ENSMUST00000200264 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm44359-201ENSMUST00000200671 138 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.3■□□□□ 0.04
Nkx2-6P43688 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-6P43688 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.29■□□□□ 0.04
Nkx2-6P43688 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms