Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hist1h1aP43275 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.44□□□□□ -0.26
Hist1h1aP43275 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hist1h1aP43275 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.43□□□□□ -0.26
Hist1h1aP43275 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Gm10653-202ENSMUST00000139570 835 ntBASIC13.43□□□□□ -0.26
Hist1h1aP43275 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.43□□□□□ -0.26
Hist1h1aP43275 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1aP43275 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1aP43275 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Gm29257-201ENSMUST00000186115 639 ntBASIC13.41□□□□□ -0.26
Hist1h1aP43275 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.41□□□□□ -0.26
Hist1h1aP43275 Timm23-208ENSMUST00000226683 750 ntBASIC13.41□□□□□ -0.26
Hist1h1aP43275 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1aP43275 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms