Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.91□□□□□ -0.02
Nkx2-2P42586 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.91□□□□□ -0.02
Nkx2-2P42586 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.9□□□□□ -0.02
Nkx2-2P42586 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.9□□□□□ -0.02
Nkx2-2P42586 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-2P42586 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Gm15794-201ENSMUST00000120182 631 ntBASIC14.89□□□□□ -0.03
Nkx2-2P42586 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.89□□□□□ -0.03
Nkx2-2P42586 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-2P42586 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-2P42586 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-2P42586 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-2P42586 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-2P42586 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms