Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nkx1-2P42580 Gm16061-201ENSMUST00000122167 857 ntBASIC20■□□□□ 0.79
Nkx1-2P42580 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20■□□□□ 0.79
Nkx1-2P42580 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nkx1-2P42580 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nkx1-2P42580 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nkx1-2P42580 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Zfp264-201ENSMUST00000208656 1563 ntBASIC20■□□□□ 0.79
Nkx1-2P42580 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.99■□□□□ 0.79
Nkx1-2P42580 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.99■□□□□ 0.79
Nkx1-2P42580 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx1-2P42580 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx1-2P42580 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx1-2P42580 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Gm13474-201ENSMUST00000122466 815 ntBASIC19.96■□□□□ 0.79
Nkx1-2P42580 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Gm7213-201ENSMUST00000215977 950 ntBASIC19.96■□□□□ 0.79
Nkx1-2P42580 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-2P42580 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-2P42580 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms