Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox6P40645 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox6P40645 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Sox6P40645 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox6P40645 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox6P40645 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox6P40645 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox6P40645 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox6P40645 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox6P40645 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Sox6P40645 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Sox6P40645 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox6P40645 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.27■□□□□ 0.04
Sox6P40645 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sox6P40645 Gm15565-201ENSMUST00000118890 427 ntBASIC15.27■□□□□ 0.04
Sox6P40645 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.27■□□□□ 0.04
Sox6P40645 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox6P40645 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sox6P40645 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox6P40645 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sox6P40645 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sox6P40645 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox6P40645 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox6P40645 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox6P40645 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox6P40645 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox6P40645 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Sox6P40645 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox6P40645 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox6P40645 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.25■□□□□ 0.03
Sox6P40645 Gm11539-201ENSMUST00000119837 557 ntBASIC15.25■□□□□ 0.03
Sox6P40645 Gm13436-201ENSMUST00000120418 567 ntBASIC15.25■□□□□ 0.03
Sox6P40645 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox6P40645 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.25■□□□□ 0.03
Sox6P40645 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms