Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn1aP39689 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.38□□□□□ -0.27
Cdkn1aP39689 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn1aP39689 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Gm11452-201ENSMUST00000122376 690 ntBASIC13.37□□□□□ -0.27
Cdkn1aP39689 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdkn1aP39689 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdkn1aP39689 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Gm13884-201ENSMUST00000118103 829 ntBASIC13.36□□□□□ -0.27
Cdkn1aP39689 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.36□□□□□ -0.27
Cdkn1aP39689 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Mzt1-203ENSMUST00000227948 952 ntBASIC13.36□□□□□ -0.27
Cdkn1aP39689 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdkn1aP39689 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdkn1aP39689 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms