Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RetP35546 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RetP35546 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RetP35546 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
RetP35546 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RetP35546 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RetP35546 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RetP35546 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RetP35546 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RetP35546 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RetP35546 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RetP35546 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RetP35546 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.2■□□□□ 0.02
RetP35546 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RetP35546 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.2■□□□□ 0.02
RetP35546 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.2■□□□□ 0.02
RetP35546 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RetP35546 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.2■□□□□ 0.02
RetP35546 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.2■□□□□ 0.02
RetP35546 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RetP35546 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RetP35546 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RetP35546 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RetP35546 Gm25925-201ENSMUST00000158314 306 ntBASIC15.19■□□□□ 0.02
RetP35546 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RetP35546 Mir8098-201ENSMUST00000184011 137 ntBASIC15.19■□□□□ 0.02
RetP35546 Gm5864-201ENSMUST00000202263 970 ntBASIC15.19■□□□□ 0.02
RetP35546 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.19■□□□□ 0.02
RetP35546 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.19■□□□□ 0.02
RetP35546 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RetP35546 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.18■□□□□ 0.02
RetP35546 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.18■□□□□ 0.02
RetP35546 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.18■□□□□ 0.02
RetP35546 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.18■□□□□ 0.02
RetP35546 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RetP35546 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RetP35546 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.17■□□□□ 0.02
RetP35546 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RetP35546 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RetP35546 Olfr129-201ENSMUST00000122318 993 ntBASIC15.17■□□□□ 0.02
RetP35546 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.17■□□□□ 0.02
RetP35546 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RetP35546 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RetP35546 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RetP35546 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms