Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Gm15173-201ENSMUST00000122049 433 ntBASIC17.35■□□□□ 0.37
Mmp3P28862 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.35■□□□□ 0.37
Mmp3P28862 Mir5126-201ENSMUST00000175513 77 ntBASIC17.35■□□□□ 0.37
Mmp3P28862 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp3P28862 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.34■□□□□ 0.37
Mmp3P28862 Gm1401-201ENSMUST00000122048 772 ntBASIC17.34■□□□□ 0.37
Mmp3P28862 Gm11780-201ENSMUST00000136880 516 ntBASIC17.34■□□□□ 0.37
Mmp3P28862 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Mmp3P28862 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Gm8655-201ENSMUST00000221159 852 ntBASIC17.34■□□□□ 0.37
Mmp3P28862 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp3P28862 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp3P28862 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp3P28862 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.33■□□□□ 0.36
Mmp3P28862 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mmp3P28862 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.33■□□□□ 0.36
Mmp3P28862 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.33■□□□□ 0.36
Mmp3P28862 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.33■□□□□ 0.36
Mmp3P28862 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.33■□□□□ 0.36
Mmp3P28862 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mmp3P28862 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp3P28862 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Mmp3P28862 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp3P28862 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp3P28862 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mmp3P28862 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp3P28862 Gm6089-201ENSMUST00000197666 938 ntBASIC17.32■□□□□ 0.36
Mmp3P28862 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.32■□□□□ 0.36
Mmp3P28862 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Mmp3P28862 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp3P28862 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp3P28862 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.31■□□□□ 0.36
Mmp3P28862 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.31■□□□□ 0.36
Mmp3P28862 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.31■□□□□ 0.36
Mmp3P28862 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp3P28862 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.31■□□□□ 0.36
Mmp3P28862 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp3P28862 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.31■□□□□ 0.36
Mmp3P28862 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp3P28862 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms