Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.84■□□□□ 0.61
Pde6aP27664 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.84■□□□□ 0.61
Pde6aP27664 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6aP27664 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6aP27664 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6aP27664 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6aP27664 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6aP27664 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.83■□□□□ 0.6
Pde6aP27664 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pde6aP27664 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6aP27664 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.83■□□□□ 0.6
Pde6aP27664 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.83■□□□□ 0.6
Pde6aP27664 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.83■□□□□ 0.6
Pde6aP27664 Gm10819-201ENSMUST00000099988 561 ntBASIC18.83■□□□□ 0.6
Pde6aP27664 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6aP27664 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6aP27664 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6aP27664 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6aP27664 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pde6aP27664 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.82■□□□□ 0.6
Pde6aP27664 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6aP27664 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pde6aP27664 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pde6aP27664 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.81■□□□□ 0.6
Pde6aP27664 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pde6aP27664 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.81■□□□□ 0.6
Pde6aP27664 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6aP27664 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pde6aP27664 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.8■□□□□ 0.6
Pde6aP27664 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pde6aP27664 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pde6aP27664 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Pde6aP27664 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
Pde6aP27664 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pde6aP27664 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6aP27664 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6aP27664 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Pde6aP27664 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6aP27664 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pde6aP27664 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms