Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.99□□□□□ -0.01
Cd40lgP27548 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Cd40lgP27548 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cd40lgP27548 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.98□□□□□ -0.01
Cd40lgP27548 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm13186-201ENSMUST00000118031 316 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm6345-202ENSMUST00000180900 204 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm37722-201ENSMUST00000193757 208 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.98□□□□□ -0.01
Cd40lgP27548 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40lgP27548 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cd40lgP27548 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.97□□□□□ -0.01
Cd40lgP27548 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
Cd40lgP27548 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.97□□□□□ -0.01
Cd40lgP27548 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.97□□□□□ -0.01
Cd40lgP27548 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40lgP27548 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.96□□□□□ -0.01
Cd40lgP27548 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Gm33142-201ENSMUST00000193913 867 ntBASIC14.96□□□□□ -0.01
Cd40lgP27548 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.96□□□□□ -0.01
Cd40lgP27548 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.96□□□□□ -0.01
Cd40lgP27548 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms