Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Col8a2P25318 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Col8a2P25318 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col8a2P25318 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Col8a2P25318 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.55□□□□□ -0.24
Col8a2P25318 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Gm13312-201ENSMUST00000119631 718 ntBASIC13.55□□□□□ -0.24
Col8a2P25318 Gm11452-201ENSMUST00000122376 690 ntBASIC13.55□□□□□ -0.24
Col8a2P25318 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.55□□□□□ -0.24
Col8a2P25318 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.55□□□□□ -0.24
Col8a2P25318 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.55□□□□□ -0.24
Col8a2P25318 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.55□□□□□ -0.24
Col8a2P25318 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.55□□□□□ -0.24
Col8a2P25318 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col8a2P25318 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.54□□□□□ -0.24
Col8a2P25318 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Gm13216-201ENSMUST00000117145 591 ntBASIC13.54□□□□□ -0.24
Col8a2P25318 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Gm27459-201ENSMUST00000184860 107 ntBASIC13.54□□□□□ -0.24
Col8a2P25318 Gm36967-201ENSMUST00000193814 266 ntBASIC13.54□□□□□ -0.24
Col8a2P25318 Gm5864-201ENSMUST00000202263 970 ntBASIC13.54□□□□□ -0.24
Col8a2P25318 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.54□□□□□ -0.24
Col8a2P25318 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col8a2P25318 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col8a2P25318 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col8a2P25318 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col8a2P25318 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col8a2P25318 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Col8a2P25318 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.53□□□□□ -0.24
Col8a2P25318 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col8a2P25318 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.53□□□□□ -0.24
Col8a2P25318 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.53□□□□□ -0.24
Col8a2P25318 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col8a2P25318 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col8a2P25318 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col8a2P25318 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col8a2P25318 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col8a2P25318 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col8a2P25318 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col8a2P25318 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col8a2P25318 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col8a2P25318 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col8a2P25318 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.52□□□□□ -0.24
Col8a2P25318 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.52□□□□□ -0.25
Col8a2P25318 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Gm43347-201ENSMUST00000200226 580 ntBASIC13.52□□□□□ -0.25
Col8a2P25318 Gm7506-201ENSMUST00000207758 815 ntBASIC13.52□□□□□ -0.25
Col8a2P25318 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col8a2P25318 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms