Protein–RNA interactions for Protein: P22339

Gadd45b, Growth arrest and DNA damage-inducible protein GADD45 beta, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gadd45bP22339 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Gadd45bP22339 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Gm13186-201ENSMUST00000118031 316 ntBASIC18.74■□□□□ 0.59
Gadd45bP22339 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Gadd45bP22339 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gadd45bP22339 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gadd45bP22339 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gadd45bP22339 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.73■□□□□ 0.59
Gadd45bP22339 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.73■□□□□ 0.59
Gadd45bP22339 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.73■□□□□ 0.59
Gadd45bP22339 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.73■□□□□ 0.59
Gadd45bP22339 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Gadd45bP22339 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gadd45bP22339 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.73■□□□□ 0.59
Gadd45bP22339 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gadd45bP22339 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Mir1199-201ENSMUST00000117015 119 ntBASIC18.72■□□□□ 0.59
Gadd45bP22339 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.72■□□□□ 0.59
Gadd45bP22339 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.72■□□□□ 0.59
Gadd45bP22339 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gadd45bP22339 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.72■□□□□ 0.59
Gadd45bP22339 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gadd45bP22339 Asic1-205ENSMUST00000228185 1818 ntBASIC18.72■□□□□ 0.59
Gadd45bP22339 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.71■□□□□ 0.59
Gadd45bP22339 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.71■□□□□ 0.59
Gadd45bP22339 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Gadd45bP22339 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gadd45bP22339 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gadd45bP22339 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.7■□□□□ 0.58
Gadd45bP22339 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.7■□□□□ 0.58
Gadd45bP22339 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.7■□□□□ 0.58
Gadd45bP22339 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gadd45bP22339 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms