Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.08■□□□□ 0.32
Zfp42P22227 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.08■□□□□ 0.32
Zfp42P22227 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.08■□□□□ 0.32
Zfp42P22227 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.08■□□□□ 0.32
Zfp42P22227 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.08■□□□□ 0.32
Zfp42P22227 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Zfp42P22227 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.08■□□□□ 0.32
Zfp42P22227 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp42P22227 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.07■□□□□ 0.32
Zfp42P22227 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.07■□□□□ 0.32
Zfp42P22227 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.07■□□□□ 0.32
Zfp42P22227 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Zfp42P22227 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Zfp42P22227 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp42P22227 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Zfp42P22227 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Zfp42P22227 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Zfp42P22227 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Zfp42P22227 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.06■□□□□ 0.32
Zfp42P22227 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp42P22227 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Zfp42P22227 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.05■□□□□ 0.32
Zfp42P22227 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.05■□□□□ 0.32
Zfp42P22227 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.05■□□□□ 0.32
Zfp42P22227 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp42P22227 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Zfp42P22227 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Zfp42P22227 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Zfp42P22227 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.04■□□□□ 0.32
Zfp42P22227 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Zfp42P22227 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.04■□□□□ 0.32
Zfp42P22227 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.04■□□□□ 0.32
Zfp42P22227 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Zfp42P22227 Actl10-202ENSMUST00000226583 1501 ntBASIC17.04■□□□□ 0.32
Zfp42P22227 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Zfp42P22227 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.04■□□□□ 0.32
Zfp42P22227 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp42P22227 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp42P22227 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Zfp42P22227 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Zfp42P22227 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.03■□□□□ 0.32
Zfp42P22227 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp42P22227 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp42P22227 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms