Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BdnfP21237 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
BdnfP21237 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.57■□□□□ 0.08
BdnfP21237 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.57■□□□□ 0.08
BdnfP21237 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.57■□□□□ 0.08
BdnfP21237 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BdnfP21237 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
BdnfP21237 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BdnfP21237 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
BdnfP21237 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.56■□□□□ 0.08
BdnfP21237 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.56■□□□□ 0.08
BdnfP21237 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.56■□□□□ 0.08
BdnfP21237 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
BdnfP21237 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
BdnfP21237 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BdnfP21237 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.55■□□□□ 0.08
BdnfP21237 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.55■□□□□ 0.08
BdnfP21237 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.55■□□□□ 0.08
BdnfP21237 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.55■□□□□ 0.08
BdnfP21237 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.55■□□□□ 0.08
BdnfP21237 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Gm5417-201ENSMUST00000079706 384 ntBASIC15.55■□□□□ 0.08
BdnfP21237 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.55■□□□□ 0.08
BdnfP21237 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
BdnfP21237 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BdnfP21237 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
BdnfP21237 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.54■□□□□ 0.08
BdnfP21237 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
BdnfP21237 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.54■□□□□ 0.08
BdnfP21237 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.54■□□□□ 0.08
BdnfP21237 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.54■□□□□ 0.08
BdnfP21237 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
BdnfP21237 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BdnfP21237 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms