Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmga1P17095 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Gm7230-201ENSMUST00000173026 815 ntBASIC16.55■□□□□ 0.24
Hmga1P17095 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.55■□□□□ 0.24
Hmga1P17095 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hmga1P17095 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hmga1P17095 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga1P17095 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmga1P17095 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hmga1P17095 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Hmga1P17095 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.54■□□□□ 0.24
Hmga1P17095 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmga1P17095 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmga1P17095 Gm6089-201ENSMUST00000197666 938 ntBASIC16.54■□□□□ 0.24
Hmga1P17095 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.54■□□□□ 0.24
Hmga1P17095 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmga1P17095 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.54■□□□□ 0.24
Hmga1P17095 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hmga1P17095 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga1P17095 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmga1P17095 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.53■□□□□ 0.24
Hmga1P17095 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmga1P17095 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.53■□□□□ 0.24
Hmga1P17095 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Hmga1P17095 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.53■□□□□ 0.24
Hmga1P17095 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmga1P17095 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga1P17095 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmga1P17095 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmga1P17095 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.52■□□□□ 0.24
Hmga1P17095 Gm27525-201ENSMUST00000184465 107 ntBASIC16.52■□□□□ 0.24
Hmga1P17095 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmga1P17095 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.52■□□□□ 0.24
Hmga1P17095 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.52■□□□□ 0.24
Hmga1P17095 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga1P17095 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hmga1P17095 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Hmga1P17095 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Hmga1P17095 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga1P17095 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hmga1P17095 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Hmga1P17095 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga1P17095 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga1P17095 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga1P17095 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hmga1P17095 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga1P17095 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga1P17095 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms