Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.59■□□□□ 0.25
Rb1P13405 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.59■□□□□ 0.25
Rb1P13405 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.59■□□□□ 0.25
Rb1P13405 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Rb1P13405 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.59■□□□□ 0.25
Rb1P13405 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rb1P13405 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rb1P13405 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rb1P13405 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rb1P13405 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.58■□□□□ 0.24
Rb1P13405 Mir8098-201ENSMUST00000184011 137 ntBASIC16.58■□□□□ 0.24
Rb1P13405 Gm27459-201ENSMUST00000184860 107 ntBASIC16.58■□□□□ 0.24
Rb1P13405 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.58■□□□□ 0.24
Rb1P13405 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.58■□□□□ 0.24
Rb1P13405 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rb1P13405 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rb1P13405 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.57■□□□□ 0.24
Rb1P13405 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.57■□□□□ 0.24
Rb1P13405 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rb1P13405 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.57■□□□□ 0.24
Rb1P13405 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rb1P13405 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rb1P13405 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rb1P13405 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Rb1P13405 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.56■□□□□ 0.24
Rb1P13405 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.56■□□□□ 0.24
Rb1P13405 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.56■□□□□ 0.24
Rb1P13405 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.56■□□□□ 0.24
Rb1P13405 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rb1P13405 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rb1P13405 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rb1P13405 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rb1P13405 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.55■□□□□ 0.24
Rb1P13405 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rb1P13405 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms