Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccl3P10855 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ccl3P10855 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccl3P10855 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccl3P10855 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Gm18622-201ENSMUST00000219361 595 ntBASIC14.32□□□□□ -0.12
Ccl3P10855 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl3P10855 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccl3P10855 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccl3P10855 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ccl3P10855 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccl3P10855 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccl3P10855 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl3P10855 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccl3P10855 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.3□□□□□ -0.12
Ccl3P10855 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
Ccl3P10855 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Gm27646-201ENSMUST00000183989 110 ntBASIC14.3□□□□□ -0.12
Ccl3P10855 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccl3P10855 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccl3P10855 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl3P10855 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccl3P10855 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccl3P10855 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccl3P10855 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Gm10175-201ENSMUST00000086013 645 ntBASIC14.29□□□□□ -0.12
Ccl3P10855 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms