Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hoxc6P10629 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hoxc6P10629 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.99■□□□□ 0.47
Hoxc6P10629 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc6P10629 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Hoxc6P10629 Mir3113-201ENSMUST00000175478 76 ntBASIC17.98■□□□□ 0.47
Hoxc6P10629 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
Hoxc6P10629 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.98■□□□□ 0.47
Hoxc6P10629 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hoxc6P10629 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc6P10629 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hoxc6P10629 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.97■□□□□ 0.47
Hoxc6P10629 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.97■□□□□ 0.47
Hoxc6P10629 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.97■□□□□ 0.47
Hoxc6P10629 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.97■□□□□ 0.47
Hoxc6P10629 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.97■□□□□ 0.47
Hoxc6P10629 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.97■□□□□ 0.47
Hoxc6P10629 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc6P10629 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hoxc6P10629 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.96■□□□□ 0.47
Hoxc6P10629 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.96■□□□□ 0.47
Hoxc6P10629 Gm27646-201ENSMUST00000183989 110 ntBASIC17.96■□□□□ 0.47
Hoxc6P10629 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc6P10629 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.96■□□□□ 0.46
Hoxc6P10629 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hoxc6P10629 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Hoxc6P10629 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Gm26308-201ENSMUST00000157768 69 ntBASIC17.95■□□□□ 0.46
Hoxc6P10629 Gm5682-201ENSMUST00000173402 505 ntBASIC17.95■□□□□ 0.46
Hoxc6P10629 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.95■□□□□ 0.46
Hoxc6P10629 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.95■□□□□ 0.46
Hoxc6P10629 Gm18622-201ENSMUST00000219361 595 ntBASIC17.95■□□□□ 0.46
Hoxc6P10629 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hoxc6P10629 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.95■□□□□ 0.46
Hoxc6P10629 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc6P10629 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hoxc6P10629 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hoxc6P10629 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.94■□□□□ 0.46
Hoxc6P10629 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.94■□□□□ 0.46
Hoxc6P10629 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.94■□□□□ 0.46
Hoxc6P10629 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.94■□□□□ 0.46
Hoxc6P10629 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc6P10629 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms