Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TnfP06804 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TnfP06804 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TnfP06804 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TnfP06804 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Gm44357-201ENSMUST00000195897 142 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm19658-201ENSMUST00000196231 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44367-201ENSMUST00000196836 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44350-201ENSMUST00000197197 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44390-201ENSMUST00000197533 144 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44313-201ENSMUST00000198018 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44486-201ENSMUST00000198508 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44314-201ENSMUST00000199263 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44394-201ENSMUST00000199558 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44484-201ENSMUST00000199873 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44466-201ENSMUST00000200264 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44359-201ENSMUST00000200671 138 ntBASIC17.21■□□□□ 0.35
TnfP06804 Gm44771-201ENSMUST00000206975 626 ntBASIC17.21■□□□□ 0.35
TnfP06804 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.21■□□□□ 0.35
TnfP06804 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.21■□□□□ 0.35
TnfP06804 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.21■□□□□ 0.35
TnfP06804 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TnfP06804 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TnfP06804 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TnfP06804 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
TnfP06804 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TnfP06804 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.2■□□□□ 0.34
TnfP06804 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.2■□□□□ 0.34
TnfP06804 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.2■□□□□ 0.34
TnfP06804 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TnfP06804 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TnfP06804 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.19■□□□□ 0.34
TnfP06804 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.19■□□□□ 0.34
TnfP06804 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TnfP06804 Gm18195-201ENSMUST00000207604 706 ntBASIC17.19■□□□□ 0.34
TnfP06804 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.19■□□□□ 0.34
TnfP06804 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TnfP06804 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TnfP06804 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TnfP06804 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TnfP06804 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TnfP06804 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.18■□□□□ 0.34
TnfP06804 Gm13216-201ENSMUST00000117145 591 ntBASIC17.18■□□□□ 0.34
TnfP06804 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.18■□□□□ 0.34
TnfP06804 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TnfP06804 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TnfP06804 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TnfP06804 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TnfP06804 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.17■□□□□ 0.34
TnfP06804 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.17■□□□□ 0.34
TnfP06804 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TnfP06804 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TnfP06804 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TnfP06804 Gm7862-201ENSMUST00000121461 292 ntBASIC17.17■□□□□ 0.34
TnfP06804 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms