Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm10812-201ENSMUST00000099864 546 ntBASIC11.91□□□□□ -0.5
P06328 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.91□□□□□ -0.5
P06328 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.91□□□□□ -0.5
P06328 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.91□□□□□ -0.5
P06328 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P06328 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
P06328 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.91□□□□□ -0.5
P06328 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
P06328 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.9□□□□□ -0.5
P06328 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.9□□□□□ -0.5
P06328 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.9□□□□□ -0.5
P06328 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.9□□□□□ -0.5
P06328 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.9□□□□□ -0.5
P06328 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.9□□□□□ -0.5
P06328 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Gm44450-201ENSMUST00000199528 114 ntBASIC11.9□□□□□ -0.5
P06328 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.9□□□□□ -0.5
P06328 Gm7370-201ENSMUST00000219471 767 ntBASIC11.9□□□□□ -0.5
P06328 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
P06328 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
P06328 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06328 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
P06328 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P06328 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P06328 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P06328 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
P06328 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
P06328 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.89□□□□□ -0.51
P06328 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.89□□□□□ -0.51
P06328 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
P06328 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.89□□□□□ -0.51
P06328 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.89□□□□□ -0.51
P06328 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P06328 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06328 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P06328 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P06328 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P06328 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P06328 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P06328 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms