Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a1P02463 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Gm2756-201ENSMUST00000195851 400 ntBASIC19.87■□□□□ 0.77
Col4a1P02463 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.87■□□□□ 0.77
Col4a1P02463 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.87■□□□□ 0.77
Col4a1P02463 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a1P02463 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a1P02463 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.86■□□□□ 0.77
Col4a1P02463 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col4a1P02463 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col4a1P02463 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.86■□□□□ 0.77
Col4a1P02463 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.86■□□□□ 0.77
Col4a1P02463 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.86■□□□□ 0.77
Col4a1P02463 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.86■□□□□ 0.77
Col4a1P02463 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.86■□□□□ 0.77
Col4a1P02463 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col4a1P02463 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a1P02463 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Col4a1P02463 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.85■□□□□ 0.77
Col4a1P02463 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Col4a1P02463 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Col4a1P02463 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a1P02463 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a1P02463 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a1P02463 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.84■□□□□ 0.77
Col4a1P02463 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.84■□□□□ 0.77
Col4a1P02463 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a1P02463 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Col4a1P02463 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.83■□□□□ 0.77
Col4a1P02463 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a1P02463 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a1P02463 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a1P02463 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.83■□□□□ 0.76
Col4a1P02463 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Col4a1P02463 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a1P02463 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.83■□□□□ 0.76
Col4a1P02463 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.82■□□□□ 0.76
Col4a1P02463 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.82■□□□□ 0.76
Col4a1P02463 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.82■□□□□ 0.76
Col4a1P02463 Gm9682-201ENSMUST00000197505 556 ntBASIC19.82■□□□□ 0.76
Col4a1P02463 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col4a1P02463 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.82■□□□□ 0.76
Col4a1P02463 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Grk6-207ENSMUST00000225925 2769 ntBASIC19.82■□□□□ 0.76
Col4a1P02463 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Col4a1P02463 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms