Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IghmP01872 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.23■□□□□ 0.03
IghmP01872 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.23■□□□□ 0.03
IghmP01872 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.23■□□□□ 0.03
IghmP01872 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.23■□□□□ 0.03
IghmP01872 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IghmP01872 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IghmP01872 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IghmP01872 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IghmP01872 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
IghmP01872 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IghmP01872 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IghmP01872 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
IghmP01872 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.21■□□□□ 0.03
IghmP01872 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.21■□□□□ 0.03
IghmP01872 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.21■□□□□ 0.03
IghmP01872 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.21■□□□□ 0.03
IghmP01872 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.21■□□□□ 0.03
IghmP01872 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.21■□□□□ 0.03
IghmP01872 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.21■□□□□ 0.03
IghmP01872 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.21■□□□□ 0.03
IghmP01872 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IghmP01872 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IghmP01872 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IghmP01872 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IghmP01872 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
IghmP01872 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IghmP01872 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IghmP01872 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IghmP01872 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.2■□□□□ 0.02
IghmP01872 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
IghmP01872 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.2■□□□□ 0.02
IghmP01872 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Gm37722-201ENSMUST00000193757 208 ntBASIC15.2■□□□□ 0.02
IghmP01872 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.2■□□□□ 0.02
IghmP01872 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.2■□□□□ 0.02
IghmP01872 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IghmP01872 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms