Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.85□□□□□ -0.03
P01852 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
P01852 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
P01852 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.85□□□□□ -0.03
P01852 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P01852 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
P01852 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P01852 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.85□□□□□ -0.03
P01852 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.84□□□□□ -0.03
P01852 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P01852 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
P01852 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.84□□□□□ -0.03
P01852 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
P01852 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.84□□□□□ -0.03
P01852 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.84□□□□□ -0.03
P01852 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P01852 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
P01852 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P01852 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
P01852 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01852 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01852 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
P01852 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
P01852 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Gm27742-201ENSMUST00000184667 60 ntBASIC14.83□□□□□ -0.04
P01852 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P01852 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
P01852 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P01852 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P01852 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P01852 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.83□□□□□ -0.04
P01852 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01852 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
P01852 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.82□□□□□ -0.04
P01852 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
P01852 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.82□□□□□ -0.04
P01852 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
P01852 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.82□□□□□ -0.04
P01852 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
P01852 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms