Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Syn1O88935 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Syn1O88935 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Syn1O88935 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.68■□□□□ 0.26
Syn1O88935 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Syn1O88935 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Syn1O88935 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.68■□□□□ 0.26
Syn1O88935 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.68■□□□□ 0.26
Syn1O88935 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syn1O88935 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Syn1O88935 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Syn1O88935 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Syn1O88935 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Syn1O88935 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.67■□□□□ 0.26
Syn1O88935 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Syn1O88935 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.67■□□□□ 0.26
Syn1O88935 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.67■□□□□ 0.26
Syn1O88935 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syn1O88935 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.67■□□□□ 0.26
Syn1O88935 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.66■□□□□ 0.26
Syn1O88935 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.66■□□□□ 0.26
Syn1O88935 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.66■□□□□ 0.26
Syn1O88935 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.66■□□□□ 0.26
Syn1O88935 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.66■□□□□ 0.26
Syn1O88935 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Syn1O88935 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.66■□□□□ 0.26
Syn1O88935 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syn1O88935 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.65■□□□□ 0.26
Syn1O88935 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
Syn1O88935 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Syn1O88935 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syn1O88935 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Syn1O88935 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Syn1O88935 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.64■□□□□ 0.25
Syn1O88935 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Syn1O88935 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Syn1O88935 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.64■□□□□ 0.25
Syn1O88935 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms