Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hdac3O88895 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.54□□□□□ -0.08
Hdac3O88895 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hdac3O88895 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hdac3O88895 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.54□□□□□ -0.08
Hdac3O88895 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.54□□□□□ -0.08
Hdac3O88895 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hdac3O88895 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hdac3O88895 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hdac3O88895 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Hdac3O88895 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hdac3O88895 Gm6433-201ENSMUST00000118634 875 ntBASIC14.53□□□□□ -0.08
Hdac3O88895 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.53□□□□□ -0.08
Hdac3O88895 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.53□□□□□ -0.08
Hdac3O88895 Mir6982-201ENSMUST00000184354 68 ntBASIC14.53□□□□□ -0.08
Hdac3O88895 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hdac3O88895 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hdac3O88895 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hdac3O88895 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hdac3O88895 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.53□□□□□ -0.08
Hdac3O88895 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hdac3O88895 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.53□□□□□ -0.08
Hdac3O88895 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.52□□□□□ -0.08
Hdac3O88895 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Hdac3O88895 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.52□□□□□ -0.08
Hdac3O88895 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hdac3O88895 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.52□□□□□ -0.09
Hdac3O88895 Gm43799-201ENSMUST00000201845 579 ntBASIC14.52□□□□□ -0.09
Hdac3O88895 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.52□□□□□ -0.09
Hdac3O88895 Gm45058-201ENSMUST00000205810 766 ntBASIC14.52□□□□□ -0.09
Hdac3O88895 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Hdac3O88895 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hdac3O88895 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hdac3O88895 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.52□□□□□ -0.09
Hdac3O88895 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.51□□□□□ -0.09
Hdac3O88895 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Hdac3O88895 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.51□□□□□ -0.09
Hdac3O88895 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms