Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Apaf1O88879 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Apaf1O88879 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Apaf1O88879 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.1■□□□□ 0.97
Apaf1O88879 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.1■□□□□ 0.97
Apaf1O88879 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.1■□□□□ 0.97
Apaf1O88879 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Apaf1O88879 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.1■□□□□ 0.97
Apaf1O88879 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.1■□□□□ 0.97
Apaf1O88879 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apaf1O88879 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.09■□□□□ 0.97
Apaf1O88879 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Gm7153-201ENSMUST00000117092 455 ntBASIC21.09■□□□□ 0.97
Apaf1O88879 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.09■□□□□ 0.97
Apaf1O88879 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.09■□□□□ 0.97
Apaf1O88879 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.09■□□□□ 0.97
Apaf1O88879 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Apaf1O88879 Hivep3-201ENSMUST00000084306 2973 ntBASIC21.09■□□□□ 0.97
Apaf1O88879 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Apaf1O88879 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apaf1O88879 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Apaf1O88879 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.08■□□□□ 0.97
Apaf1O88879 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.08■□□□□ 0.97
Apaf1O88879 Gm27459-201ENSMUST00000184860 107 ntBASIC21.08■□□□□ 0.97
Apaf1O88879 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.08■□□□□ 0.97
Apaf1O88879 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Apaf1O88879 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Apaf1O88879 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Apaf1O88879 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Apaf1O88879 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Apaf1O88879 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Apaf1O88879 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Apaf1O88879 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Apaf1O88879 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Apaf1O88879 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.07■□□□□ 0.96
Apaf1O88879 Gm12644-201ENSMUST00000119935 606 ntBASIC21.07■□□□□ 0.96
Apaf1O88879 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.07■□□□□ 0.96
Apaf1O88879 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.07■□□□□ 0.96
Apaf1O88879 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apaf1O88879 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apaf1O88879 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apaf1O88879 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Apaf1O88879 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Apaf1O88879 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Apaf1O88879 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Apaf1O88879 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Apaf1O88879 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.06■□□□□ 0.96
Apaf1O88879 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.06■□□□□ 0.96
Apaf1O88879 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.06■□□□□ 0.96
Apaf1O88879 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Apaf1O88879 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Apaf1O88879 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Apaf1O88879 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apaf1O88879 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Apaf1O88879 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Apaf1O88879 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms