Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cops3O88543 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.57□□□□□ -0.08
Cops3O88543 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cops3O88543 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cops3O88543 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.56□□□□□ -0.08
Cops3O88543 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.56□□□□□ -0.08
Cops3O88543 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cops3O88543 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.56□□□□□ -0.08
Cops3O88543 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cops3O88543 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cops3O88543 Actl10-202ENSMUST00000226583 1501 ntBASIC14.56□□□□□ -0.08
Cops3O88543 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops3O88543 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cops3O88543 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Gm715-201ENSMUST00000117865 831 ntBASIC14.55□□□□□ -0.08
Cops3O88543 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Odf3b-204ENSMUST00000227834 930 ntBASIC14.55□□□□□ -0.08
Cops3O88543 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.55□□□□□ -0.08
Cops3O88543 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.55□□□□□ -0.08
Cops3O88543 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Cops3O88543 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cops3O88543 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops3O88543 Phf7-203ENSMUST00000226565 1971 ntBASIC14.54□□□□□ -0.08
Cops3O88543 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.54□□□□□ -0.08
Cops3O88543 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.54□□□□□ -0.08
Cops3O88543 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.54□□□□□ -0.08
Cops3O88543 Gm13186-201ENSMUST00000118031 316 ntBASIC14.54□□□□□ -0.08
Cops3O88543 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.54□□□□□ -0.08
Cops3O88543 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.54□□□□□ -0.08
Cops3O88543 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms