Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.81■□□□□ 0.28
Shoc2O88520 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shoc2O88520 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.81■□□□□ 0.28
Shoc2O88520 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Shoc2O88520 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.8■□□□□ 0.28
Shoc2O88520 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shoc2O88520 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Shoc2O88520 Gm11355-201ENSMUST00000121120 306 ntBASIC16.8■□□□□ 0.28
Shoc2O88520 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.8■□□□□ 0.28
Shoc2O88520 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shoc2O88520 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.79■□□□□ 0.28
Shoc2O88520 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.79■□□□□ 0.28
Shoc2O88520 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.79■□□□□ 0.28
Shoc2O88520 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Gm37722-201ENSMUST00000193757 208 ntBASIC16.79■□□□□ 0.28
Shoc2O88520 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.79■□□□□ 0.28
Shoc2O88520 Gm18115-201ENSMUST00000221209 621 ntBASIC16.79■□□□□ 0.28
Shoc2O88520 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shoc2O88520 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.78■□□□□ 0.28
Shoc2O88520 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shoc2O88520 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Shoc2O88520 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.78■□□□□ 0.28
Shoc2O88520 Gm7977-201ENSMUST00000193787 748 ntBASIC16.78■□□□□ 0.28
Shoc2O88520 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Shoc2O88520 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shoc2O88520 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Shoc2O88520 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Gm44450-201ENSMUST00000199528 114 ntBASIC16.77■□□□□ 0.28
Shoc2O88520 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shoc2O88520 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.77■□□□□ 0.27
Shoc2O88520 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shoc2O88520 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shoc2O88520 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shoc2O88520 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shoc2O88520 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shoc2O88520 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms