Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3bO88509 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3bO88509 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gm17661-201ENSMUST00000170317 270 ntBASIC15.69■□□□□ 0.1
Dnmt3bO88509 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3bO88509 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.68■□□□□ 0.1
Dnmt3bO88509 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Dnmt3bO88509 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3bO88509 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.67■□□□□ 0.1
Dnmt3bO88509 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.67■□□□□ 0.1
Dnmt3bO88509 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.67■□□□□ 0.1
Dnmt3bO88509 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.66■□□□□ 0.1
Dnmt3bO88509 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms