Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.06■□□□□ 0
Tnfrsf17O88472 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf17O88472 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf17O88472 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tnfrsf17O88472 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf17O88472 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gm27646-201ENSMUST00000183989 110 ntBASIC15.05■□□□□ -0
Tnfrsf17O88472 Gm43767-201ENSMUST00000198933 381 ntBASIC15.05■□□□□ -0
Tnfrsf17O88472 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Tnfrsf17O88472 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf17O88472 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Tnfrsf17O88472 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.05■□□□□ -0
Tnfrsf17O88472 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf17O88472 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.05■□□□□ -0
Tnfrsf17O88472 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf17O88472 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Tnfrsf17O88472 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.04■□□□□ -0
Tnfrsf17O88472 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.04■□□□□ -0
Tnfrsf17O88472 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf17O88472 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf17O88472 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm44335-201ENSMUST00000196879 141 ntBASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm44297-201ENSMUST00000198304 141 ntBASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm44346-201ENSMUST00000198851 141 ntBASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm45167-201ENSMUST00000208007 322 ntBASIC15.04■□□□□ -0
Tnfrsf17O88472 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf17O88472 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Grk6-206ENSMUST00000224995 2971 ntBASIC15.03■□□□□ -0
Tnfrsf17O88472 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.03■□□□□ -0
Tnfrsf17O88472 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf17O88472 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.02■□□□□ -0
Tnfrsf17O88472 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf17O88472 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.02■□□□□ -0
Tnfrsf17O88472 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf17O88472 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.02■□□□□ -0
Tnfrsf17O88472 Gm25406-201ENSMUST00000157599 105 ntBASIC15.02■□□□□ -0
Tnfrsf17O88472 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.02■□□□□ -0
Tnfrsf17O88472 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.02■□□□□ -0
Tnfrsf17O88472 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.02■□□□□ -0
Tnfrsf17O88472 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.02■□□□□ -0
Tnfrsf17O88472 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms