Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm18115-201ENSMUST00000221209 621 ntBASIC17.98■□□□□ 0.47
IkbkbO88351 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IkbkbO88351 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
IkbkbO88351 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.97■□□□□ 0.47
IkbkbO88351 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
IkbkbO88351 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.97■□□□□ 0.47
IkbkbO88351 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.97■□□□□ 0.47
IkbkbO88351 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
IkbkbO88351 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.97■□□□□ 0.47
IkbkbO88351 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IkbkbO88351 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.96■□□□□ 0.47
IkbkbO88351 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
IkbkbO88351 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.96■□□□□ 0.47
IkbkbO88351 Gm9103-201ENSMUST00000119371 405 ntBASIC17.96■□□□□ 0.47
IkbkbO88351 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
IkbkbO88351 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IkbkbO88351 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
IkbkbO88351 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
IkbkbO88351 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
IkbkbO88351 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
IkbkbO88351 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.95■□□□□ 0.46
IkbkbO88351 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.95■□□□□ 0.46
IkbkbO88351 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.95■□□□□ 0.46
IkbkbO88351 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
IkbkbO88351 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
IkbkbO88351 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.95■□□□□ 0.46
IkbkbO88351 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.95■□□□□ 0.46
IkbkbO88351 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IkbkbO88351 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.95■□□□□ 0.46
IkbkbO88351 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
IkbkbO88351 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.94■□□□□ 0.46
IkbkbO88351 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.94■□□□□ 0.46
IkbkbO88351 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
IkbkbO88351 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
IkbkbO88351 Gm44450-201ENSMUST00000199528 114 ntBASIC17.94■□□□□ 0.46
IkbkbO88351 Gm45328-201ENSMUST00000210942 917 ntBASIC17.94■□□□□ 0.46
IkbkbO88351 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
IkbkbO88351 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms