Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Slc4a4O88343 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc4a4O88343 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc4a4O88343 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Slc4a4O88343 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.14■□□□□ 0.65
Slc4a4O88343 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.14■□□□□ 0.65
Slc4a4O88343 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
Slc4a4O88343 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc4a4O88343 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc4a4O88343 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc4a4O88343 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.13■□□□□ 0.65
Slc4a4O88343 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc4a4O88343 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.13■□□□□ 0.65
Slc4a4O88343 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.13■□□□□ 0.65
Slc4a4O88343 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc4a4O88343 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Slc4a4O88343 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Slc4a4O88343 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.12■□□□□ 0.65
Slc4a4O88343 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc4a4O88343 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.12■□□□□ 0.65
Slc4a4O88343 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc4a4O88343 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Slc4a4O88343 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.12■□□□□ 0.65
Slc4a4O88343 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc4a4O88343 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Slc4a4O88343 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc4a4O88343 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Slc4a4O88343 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc4a4O88343 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc4a4O88343 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc4a4O88343 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.1■□□□□ 0.65
Slc4a4O88343 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.1■□□□□ 0.65
Slc4a4O88343 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.1■□□□□ 0.65
Slc4a4O88343 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.1■□□□□ 0.65
Slc4a4O88343 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc4a4O88343 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms