Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ubr1O70481 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.98■□□□□ 0.95
Ubr1O70481 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Ubr1O70481 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubr1O70481 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ubr1O70481 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.97■□□□□ 0.95
Ubr1O70481 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.97■□□□□ 0.95
Ubr1O70481 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.97■□□□□ 0.95
Ubr1O70481 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.97■□□□□ 0.95
Ubr1O70481 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.97■□□□□ 0.95
Ubr1O70481 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ubr1O70481 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.97■□□□□ 0.95
Ubr1O70481 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr1O70481 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ubr1O70481 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr1O70481 Gm15358-201ENSMUST00000119249 520 ntBASIC20.96■□□□□ 0.95
Ubr1O70481 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr1O70481 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr1O70481 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ubr1O70481 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubr1O70481 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ubr1O70481 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.95■□□□□ 0.94
Ubr1O70481 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ubr1O70481 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr1O70481 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.95■□□□□ 0.94
Ubr1O70481 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr1O70481 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ubr1O70481 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr1O70481 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.95■□□□□ 0.94
Ubr1O70481 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.95■□□□□ 0.94
Ubr1O70481 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ubr1O70481 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.95■□□□□ 0.94
Ubr1O70481 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ubr1O70481 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.94■□□□□ 0.94
Ubr1O70481 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ubr1O70481 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ubr1O70481 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ubr1O70481 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ubr1O70481 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubr1O70481 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ubr1O70481 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ubr1O70481 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ubr1O70481 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.93■□□□□ 0.94
Ubr1O70481 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ubr1O70481 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ubr1O70481 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr1O70481 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.92■□□□□ 0.94
Ubr1O70481 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ubr1O70481 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.92■□□□□ 0.94
Ubr1O70481 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Gm5177-201ENSMUST00000183092 997 ntBASIC20.92■□□□□ 0.94
Ubr1O70481 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.92■□□□□ 0.94
Ubr1O70481 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr1O70481 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.92■□□□□ 0.94
Ubr1O70481 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ubr1O70481 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Ubr1O70481 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms