Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.87■□□□□ 0.45
Prom1O54990 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.87■□□□□ 0.45
Prom1O54990 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Prom1O54990 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Prom1O54990 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prom1O54990 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Gm9172-201ENSMUST00000212092 954 ntBASIC17.86■□□□□ 0.45
Prom1O54990 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.86■□□□□ 0.45
Prom1O54990 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.86■□□□□ 0.45
Prom1O54990 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prom1O54990 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.85■□□□□ 0.45
Prom1O54990 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.85■□□□□ 0.45
Prom1O54990 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.85■□□□□ 0.45
Prom1O54990 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Prom1O54990 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prom1O54990 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.85■□□□□ 0.45
Prom1O54990 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prom1O54990 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Gm23935-201ENSMUST00000102303 57 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Gm24270-201ENSMUST00000102326 57 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Gm24245-201ENSMUST00000157318 57 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Gm9727-201ENSMUST00000161387 555 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Gm27646-201ENSMUST00000183989 110 ntBASIC17.84■□□□□ 0.45
Prom1O54990 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.84■□□□□ 0.45
Prom1O54990 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prom1O54990 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Prom1O54990 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Prom1O54990 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Prom1O54990 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prom1O54990 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Prom1O54990 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms