Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Kcnu1O54982 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Kcnu1O54982 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.32■□□□□ 0.36
Kcnu1O54982 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Kcnu1O54982 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.32■□□□□ 0.36
Kcnu1O54982 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Kcnu1O54982 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Kcnu1O54982 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcnu1O54982 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.31■□□□□ 0.36
Kcnu1O54982 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Kcnu1O54982 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Kcnu1O54982 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.31■□□□□ 0.36
Kcnu1O54982 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.31■□□□□ 0.36
Kcnu1O54982 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcnu1O54982 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Kcnu1O54982 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Kcnu1O54982 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.3■□□□□ 0.36
Kcnu1O54982 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Kcnu1O54982 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Gm18101-201ENSMUST00000215769 548 ntBASIC17.3■□□□□ 0.36
Kcnu1O54982 Gm9987-201ENSMUST00000069768 567 ntBASIC17.3■□□□□ 0.36
Kcnu1O54982 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcnu1O54982 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Kcnu1O54982 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Kcnu1O54982 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Kcnu1O54982 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.29■□□□□ 0.36
Kcnu1O54982 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Kcnu1O54982 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Kcnu1O54982 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcnu1O54982 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Kcnu1O54982 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Kcnu1O54982 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.28■□□□□ 0.36
Kcnu1O54982 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Kcnu1O54982 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Kcnu1O54982 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.28■□□□□ 0.36
Kcnu1O54982 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcnu1O54982 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms