Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.35□□□□□ -0.11
Dkk1O54908 AC154843.1-201ENSMUST00000226897 1138 ntBASIC14.35□□□□□ -0.11
Dkk1O54908 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Dkk1O54908 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.35□□□□□ -0.11
Dkk1O54908 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dkk1O54908 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Dkk1O54908 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Dkk1O54908 Gm14417-201ENSMUST00000120036 1074 ntBASIC14.34□□□□□ -0.11
Dkk1O54908 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.34□□□□□ -0.11
Dkk1O54908 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Gm6182-201ENSMUST00000156439 1208 ntBASIC14.34□□□□□ -0.11
Dkk1O54908 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.34□□□□□ -0.11
Dkk1O54908 Gm27389-201ENSMUST00000183622 195 ntBASIC14.34□□□□□ -0.11
Dkk1O54908 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC14.34□□□□□ -0.11
Dkk1O54908 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC14.34□□□□□ -0.11
Dkk1O54908 Gm45074-201ENSMUST00000209091 1240 ntBASIC14.34□□□□□ -0.11
Dkk1O54908 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Dkk1O54908 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
Dkk1O54908 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dkk1O54908 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dkk1O54908 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Dkk1O54908 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dkk1O54908 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dkk1O54908 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Dkk1O54908 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm16420-201ENSMUST00000120258 856 ntBASIC14.33□□□□□ -0.12
Dkk1O54908 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC14.33□□□□□ -0.12
Dkk1O54908 Gm42734-201ENSMUST00000201656 878 ntBASIC14.33□□□□□ -0.12
Dkk1O54908 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC14.33□□□□□ -0.12
Dkk1O54908 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.33□□□□□ -0.12
Dkk1O54908 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Dkk1O54908 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dkk1O54908 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dkk1O54908 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.32□□□□□ -0.12
Dkk1O54908 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.32□□□□□ -0.12
Dkk1O54908 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm11893-201ENSMUST00000117829 491 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms