Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.69□□□□□ -0.22
Ccr6O54689 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.69□□□□□ -0.22
Ccr6O54689 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccr6O54689 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccr6O54689 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccr6O54689 Gm10517-202ENSMUST00000192970 758 ntBASIC13.68□□□□□ -0.22
Ccr6O54689 Gm18671-201ENSMUST00000214826 683 ntBASIC13.68□□□□□ -0.22
Ccr6O54689 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ccr6O54689 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccr6O54689 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccr6O54689 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccr6O54689 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccr6O54689 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccr6O54689 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccr6O54689 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccr6O54689 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccr6O54689 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccr6O54689 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccr6O54689 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccr6O54689 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccr6O54689 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccr6O54689 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccr6O54689 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccr6O54689 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccr6O54689 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccr6O54689 Gm18025-201ENSMUST00000221733 862 ntBASIC13.66□□□□□ -0.22
Ccr6O54689 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccr6O54689 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccr6O54689 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccr6O54689 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccr6O54689 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms