Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SpibO35906 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.84■□□□□ 0.45
SpibO35906 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SpibO35906 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.84■□□□□ 0.45
SpibO35906 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.84■□□□□ 0.45
SpibO35906 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SpibO35906 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SpibO35906 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.84■□□□□ 0.45
SpibO35906 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SpibO35906 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SpibO35906 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SpibO35906 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Gm27702-201ENSMUST00000184512 56 ntBASIC17.83■□□□□ 0.44
SpibO35906 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.83■□□□□ 0.44
SpibO35906 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.83■□□□□ 0.44
SpibO35906 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.83■□□□□ 0.44
SpibO35906 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.83■□□□□ 0.44
SpibO35906 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SpibO35906 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SpibO35906 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SpibO35906 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SpibO35906 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.82■□□□□ 0.44
SpibO35906 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SpibO35906 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.82■□□□□ 0.44
SpibO35906 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.82■□□□□ 0.44
SpibO35906 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.82■□□□□ 0.44
SpibO35906 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.82■□□□□ 0.44
SpibO35906 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.82■□□□□ 0.44
SpibO35906 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SpibO35906 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SpibO35906 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SpibO35906 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SpibO35906 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SpibO35906 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SpibO35906 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.81■□□□□ 0.44
SpibO35906 Gm10175-201ENSMUST00000086013 645 ntBASIC17.81■□□□□ 0.44
SpibO35906 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SpibO35906 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SpibO35906 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SpibO35906 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Gm11764-201ENSMUST00000120221 623 ntBASIC17.8■□□□□ 0.44
SpibO35906 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.8■□□□□ 0.44
SpibO35906 Gm25911-201ENSMUST00000157621 56 ntBASIC17.8■□□□□ 0.44
SpibO35906 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SpibO35906 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.8■□□□□ 0.44
SpibO35906 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Gm43575-201ENSMUST00000196420 516 ntBASIC17.8■□□□□ 0.44
SpibO35906 Gm2213-201ENSMUST00000197485 688 ntBASIC17.8■□□□□ 0.44
SpibO35906 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.8■□□□□ 0.44
SpibO35906 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SpibO35906 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms